Now it's time to introduce you to the SLAC analysis.
The general workflow with phylogenetics tools is:
- Upload your data via "Get Data"->"Upload File"
- Validate your data via "Phylogenetics"->"Data Reader"
- Run analysis e.g. SLAC via "Phylogenetics"->"SLAC"
SLAC analysis creates an HTML table report. Rows with substitutions can be unfolded to show details of each substitution.
I've also provided some documentation on running SLAC and understanding its output.
Running instance of Galaxy where you can play with SLAC can be found here.
No comments:
Post a Comment